NGLess
stable
  • Introduction
  • Installation
  • NG-meta-profiler
  • What’s New (History)
  • List of backwards compatibility fixes
  • Human Gut Metagenomics Functional & Taxonomic Profiling
  • Ocean Metagenomics Functional Profiling
  • Ocean Metagenomics Assembly and Gene Prediction
  • Command line options
  • Command Line Wrappers
  • NGLess one liners
  • Preprocessing FastQ Data
  • NGLess Builtin Functions
  • Methods
  • The load_fastq_directory function
  • YAML based sample lists
  • Standard library
  • Modules
  • Counting in NGLess
  • NGLess Constants
  • Available Reference Genomes
  • Configuration
  • Search path expansion
  • Reproducible Computation With NGLess
  • Frequently Asked Questions
  • NGLessPy: NGLess in Python
  • Common Workflow Language Integrations
  • Advanced options
  • NGLess Language
  • Mapping
  • Contacts
  • Software used by NGLess
NGLess
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