NGLess
test_rtfd
Introduction
Installation
NG-meta-profiler
What’s New (History)
List of backwards compatibility fixes
Ocean Metagenomics Functional Profiling
Ocean Metagenomics Assembly and Gene Prediction
Human Gut Metagenomics Functional & Taxonomic Profiling
Command line options
Command Line Wrappers
NGLess one liners
Preprocessing FastQ Data
NGLess Builtin Functions
Methods
Standard library
Modules
NGLess Constants
Available Reference Genomes
Taxonomic profiling using mOTUs with ngless
Configuration
Search path expansion
Reproducible Computation With NGLess
Frequently Asked Questions
NGLessPy: NGLess in Python
Common Workflow Language Integrations
Advanced options
NGLess Language
Mapping
Software used by NGLess
NGLess
Docs
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Index
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Index